Skip to main content

Table 2 Primers designs used for Real Time Polymerase Chain Reaction (RT-PCR)

From: Caspase recruitment domain (CARD) family (CARD9, CARD10, CARD11, CARD14 and CARD15) are increased during active inflammation in patients with inflammatory bowel disease

GENE

GENEBANK

OLIGO LEFT

OLIGO RIGHT

UNIVERSAL PROBE LIBRARY

AMPLICON SIZE

CARD9

NM_052814.3, NM_052813.4

ggagacgctcgtcctgag

aggtcctgggggagtgag

79

gagacgctcgtcctgagctccgacctggaagatggctcacccaggaggtcccaggagctctcactcccccaggacct

CARD10

NM_014550.3

actaccccgaacacttcacg

gtcatcaagaattgggtcagg

72

actaccccgaacacttcacgctgctcacgggccaggaacccgcccagcgctgctccatgatcctcgatgaggaggggcctgagggcctgacccaattcttgatgac

CARD11

NM_032415.4

cagaggagctgcgagacaa

ggtgcttgtacatttcacagtcc

1

cagaggagctgcgagacaagtacctggaggagaaggaggacctggagctcaagtgctcgaccctgggaaaggactgtgaaatgtacaagcacc

CARD14

NM_024110.3

gagctcctagacacggcaga

cgagacatcaagccttccag

71

gagctcctagacacggcagaccttccgcagctggaaagcagcctgcagccagtctcccctggaaggcttgatgtctc

CARD15

NM_022162.1

gtgtcctcctcggacattct

ggaccctgagaccagcag

36

gtgtcctcctcggacattctccgggttgtgaaatgtgctcgcaggaggcttttcaggcacagaggagccagctggtcgagctgctggtctcagggtcc

GAPDH

NM_002046.3

agccacatcgctcagaca

gcccaatacgaccaaatcc

60

agccacatcgctcagacaccatggggaaggtgaaggtcggagtcaacggatttggtcgtattgggc

  1. CARD9 assay was designed to detect both transcript isoforms (Universal Probe Library)