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Table 2 Genes from which correlation mosaics in Figure 3A were derived. Genes in this table show the highest level of correlation by DFA analysis comparing adult and cord blood monocytes.

From: A dynamic model of gene expression in monocytes reveals differences in immediate/early response genes between adult and neonatal cells

Order in mosaic Accession No. Gene symbol Description
1 NM_017614 BHMT2 Betaine-homocysteine methyltransferase 2
2 NM_001651 AQP5 Aquaporin 5
3 NM_020163 LOC56920 Semaphorin sem2
4 NM_012343 NNT Nicotinamide nucleotide transhydrogenase
5 NM_000096 CP Ceruloplasmin (ferroxidase)
6 NM_005819 STX6 Syntaxin 6
7 NM_052951 C20orf167 Chromosome 20 open reading frame 167
8 NM_001348 DAPK3 Death-associated protein kinase 3
9 X73502 KRT20 Cytokeratin 20
10 NM_052887 TIRAP Toll-interleukin 1 receptor (TIR) domain-containing adapter protein
11 NM_019555 ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3
12 NM_014380 NGFRAP1 Nerve growth factor receptor (TNFRSF16) associated protein 1
13 NM_001272 CHD3 Chromodomain helicase DNA binding protein 3
14 NM_005842 SPRY2 Sprouty homolog 2 (Drosophila)
15 NM_012332 MT-ACT48 Mitochondrial Acyl-CoA Thioesterase
16 BC015041 VATI Vesicle amine transport protein 1
17 NM_003872 NRP2 Neuropilin 2
18 NM_005849 IGSF6 Immunoglobulin superfamily, member 6
19 NM_014323 ZNF278 Zinc finger protein 278
20 NM_030674 SLC38A1 Solute carrier family 38, member 1
21 NM_004153 ORC1L Origin recognition complex, subunit 1-like (yeast)
22 NM_005249 FOXG1B Forkhead box G1B
23 NM_021048 MAGEA10 Melanoma antigen, family A, 10
24 M60502 FLG Filaggrin
25 NM_004997 MYBPH Myosin binding protein H
26 J05046 INSRR Insulin receptor-related receptor
27 M33987 CA1 Carbonic anhydrase I
28 D31886 RAB3GAP RAB3 GTPase-ACTIVATING PROTEIN
29 L24498 GADD45A Growth arrest and DNA-damage-inducible, alpha
30 L07590 PPP2R3 Protein phosphatase 2 (formerly 2A), regulatory subunit B" (PR 72), alpha isoform and (PR 130), bet
31 D87024 IGLV4-3 Immunoglobulin lambda variable 4-3
32 L35848 MS4A3 Membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
33 M18216 CEACAM6 Carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
34 M11952 TRBV7–8 T cell receptor beta variable 7–8
35 D89094 PDE5A Phosphodiesterase 5A, cGMP-specific
36 M77140 GAL Galanin
37 D13628 ANGPT1 Angiopoietin 1
38 M81635 EPB72 Erythrocyte membrane protein band 7.2 (stomatin)
39 D89859 ZFP161 Zinc finger protein 161 homolog (mouse)
40 D26069 CENTB2 Centaurin, beta 2
41 L10717 ITK IL2-inducible T-cell kinase
42 L04282 ZNF148 Zinc finger protein 148 (pHZ-52)
43 L41944 IFNAR2 Interferon (alpha, beta and omega) receptor 2
44 M82882 ELF1 E74-like factor 1 (ets domain transcription factor)
45 L26339 RCD-8 Autoantigen
46 D87328 HLCS Holocarboxylase synthetase (biotin-[proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
47 D00943 MYH6 Myosin, heavy polypeptide 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)
48 D00099 ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
49 L36531 ITGA8 Integrin, alpha 8
50 D42084 METAP1 Methionyl aminopeptidase 1
51 M76766 GTF2B General transcription factor IIB
52 J04621 SDC2 Syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan)
53 D31888 RCOR REST corepressor
54 L32832 ATBF1 AT-binding transcription factor 1
55 D86981 APPBP2 Amyloid beta precursor protein (cytoplasmic tail) binding protein 2
56 M94362 LMNB2 Lamin B2
57 M54968 KRAS2 V-Ki-ras2 Kirsten rat sarcoma 2 viral oncogene homolog
58 D42046 DNA2L DNA2 DNA replication helicase 2-like (yeast)
59 D86964 DOCK2 Dedicator of cyto-kinesis 2
60 D50683 TGFBR2 Transforming growth factor, beta receptor II (70–80 kD)
61 M96843 ID2B Striated muscle contraction regulatory protein
62 M61906 PIK3R1 Phosphoinositide-3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
63 M12679 HUMMHCW1A Cw1 antigen
64 M63623 OMG Oligodendrocyte myelin glycoprotein
65 J04162 FCGR3B Fc fragment of IgG, low affinity IIIb, receptor for (CD16)
66 L48516 PON3 Paraoxonase 3
67 M54927 PLP1 Proteolipid protein1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated)
68 D86973 GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
69 D43968 RUNX1 Runt-related transcription factor 1 (acute myeloid leukemia 1-aml1 oncogene)
70 L05500 ADCY1 Adenylate cyclase 1 (brain)
71 D80010 LPIN1 Lipin 1
72 D50918 SEPT6 Septin 6
73 D86988 RENT1 Regulator of nonsense transcripts 1
74 M90391 IL16 Interleukin 16 (lymphocyte chemoattractant factor)
75 M62324 MRF-1 Modulator recognition factor I
76 L77565 DGS-H DiGeorge syndrome gene H
77 D86970 TIAF1 TGFB1-induced anti-apoptotic factor 1
78 D38169 ITPKC Inositol 1,4,5-trisphosphate 3-kinase C
79 D87684 UBXD2 UBX domain-containing 2
80 D84454 SLC35A2 Solute carrier family 35 (UDP-galactose transporter), member 2
81 M97496 GUCA2A Guanylate cyclase activator 2A (guanylin)
82 M95585 HLF Hepatic leukemia factor
83 L38517 IHH Indian hedgehog homolog (Drosophila)
84 L20860 GP1BB Glycoprotein Ib (platelet), beta polypeptide
85 M26880 UBC Ubiquitin C
86 D86962 GRB10 Growth factor receptor-bound protein 10
87 D63481 SCRIB Scribble
88 D17525 MASP1 Mannan-binding lectin serine protease 1 (C4/C2 activating component of Ra-reactive factor)
89 L26584 RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1
90 M65066 PRKAR1B Protein kinase, cAMP-dependent, regulatory, type I, beta
91 J05158 CPN2 Carboxypeptidase N, polypeptide 2, 83 kD
92 L36861 GUCA1A Guanylate cyclase activator 1A (retina)
93 L11239 GBX1 Gastrulation brain homeo box 1
94 D90145 SCYA3L1 Small inducible cytokine A3-like 1
95 M96739 NHLH1 Nescient helix loop helix 1
96 M12959 TRA@ T cell receptor alpha locus
97 D80005 C9orf10 C9orf10 protein
98 M13231 TRGC2 T cell receptor gamma constant 2
99 D28588 SP2 Sp2 transcription factor
100 M57732 TCF1 Transcription factor 1, hepatic-LF-B1, hepatic nuclear factor (HNF1), albumin proximal factor
101 NM_014755 TRIP-Br2 Transcriptional regulator interacting with the PHS-bromodomain 2
102 NM_000576 IL1B Interleukin 1, beta
103 NM_002089 GRO2 GRO2 oncogene
104 NM_002089x GPRC5D G protein-coupled receptor, family C, group 5, member D
105 NM_002713 PPP1R8 Protein phosphatase 1, regulatory (inhibitor) subunit 8
106 NM_014383 TZFP Testis zinc finger protein
107 NM_012248 SPS2 Selenophosphate synthetase 2
108 AL137438 SEC15L SEC15 (S. cerevisiae)-like
109 NM_005387 NUP98 Nucleoporin 98 kD
110 NM_003476 CSRP3 Cysteine and glycine-rich protein 3 (cardiac LIM protein)